dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01390
Location and strand information: 1454861 - 1455580 (-)
Family: 9.B.114.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01391
Location and strand information: 1455786 - 1456670 (-)
Family: null
Protein type: null
Protein description: Cytidine deaminase

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01392
Location and strand information: 1456818 - 1457513 (-)
Family: 2.A.122.1.1
Protein type: TC
Protein description: Inner membrane protein YohK

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01393
Location and strand information: 1457510 - 1457908 (-)
Family: 1.E.14.1.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01394
Location and strand information: 1458123 - 1459061 (+)
Family: null
Protein type: null
Protein description: tRNA-dihydrouridine(16) synthase

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01395
Location and strand information: 1459271 - 1460005 (-)
Family: null
Protein type: null
Protein description: Trans-aconitate 2-methyltransferase

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01396
Location and strand information: 1460175 - 1461614 (+)
Family: 1.B.17.3.10
Protein type: TC
Protein description: Solvent efflux pump outer membrane protein SrpC

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01397
Location and strand information: 1461633 - 1462211 (-)
Family: 9.B.27.2.7
Protein type: TC
Protein description: Inner membrane protein YohD

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01398
Location and strand information: 1462375 - 1462962 (+)
Family: 9.B.29.3.1
Protein type: TC
Protein description: Inner membrane protein YohC

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01399
Location and strand information: 1463143 - 1464078 (+)
Family: null
Protein type: null
Protein description: D-alanyl-D-alanine endopeptidase

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01400
Location and strand information: 1464143 - 1465855 (-)
Family: null
Protein type: null
Protein description: Quinone-dependent D-lactate dehydrogenase

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01401
Location and strand information: 1466088 - 1468385 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 5.7632
Protein molecular weight: 83485.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01402
Location and strand information: 1468615 - 1469532 (+)
Family: 3.A.1.12.15
Protein type: TC
Protein description: Glycine betaine-binding protein YehZ

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01403
Location and strand information: 1469548 - 1470714 (+)
Family: 3.A.1.12.15
Protein type: TC
Protein description: Glycine betaine uptake system permease protein YehY

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01404
Location and strand information: 1470707 - 1471654 (+)
Family: 3.A.1.12.15
Protein type: TC
Protein description: Glycine betaine uptake system ATP-binding protein YehX

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01405
Location and strand information: 1471638 - 1472369 (+)
Family: 3.A.1.12.15
Protein type: TC
Protein description: Glycine betaine uptake system permease protein YehW

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01406
Location and strand information: 1472350 - 1472457 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01407
Location and strand information: 1472510 - 1473241 (-)
Family: MerR
Protein type: TF
Protein description: HTH-type transcriptional regulator MlrA

Gene clsuter ID: MGYG000002535_1|CGC17
Gene ID: MGYG000002535_01408
Location and strand information: 1473468 - 1475153 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: Sensor histidine kinase BtsS

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002535_01390	hypothetical protein	TC	1454861	1455580	-	9.B.114.1.1
MGYG000002535_01391	Cytidine deaminase	null	1455786	1456670	-	dCMP_cyt_deam_1\| dCMP_cyt_deam_2
MGYG000002535_01392	Inner membrane protein YohK	TC	1456818	1457513	-	2.A.122.1.1
MGYG000002535_01393	hypothetical protein	TC	1457510	1457908	-	1.E.14.1.4
MGYG000002535_01394	tRNA-dihydrouridine(16) synthase	null	1458123	1459061	+	Dus
MGYG000002535_01395	Trans-aconitate 2-methyltransferase	null	1459271	1460005	-	Methyltransf_11
MGYG000002535_01396	Solvent efflux pump outer membrane protein SrpC	TC	1460175	1461614	+	1.B.17.3.10
MGYG000002535_01397	Inner membrane protein YohD	TC	1461633	1462211	-	9.B.27.2.7
MGYG000002535_01398	Inner membrane protein YohC	TC	1462375	1462962	+	9.B.29.3.1
MGYG000002535_01399	D-alanyl-D-alanine endopeptidase	null	1463143	1464078	+	Peptidase_S11
MGYG000002535_01400	Quinone-dependent D-lactate dehydrogenase	null	1464143	1465855	-	FAD_binding_4\| Lact-deh-memb
MGYG000002535_01401	Beta-glucosidase BoGH3B	CAZyme	1466088	1468385	+	GH3
MGYG000002535_01402	Glycine betaine-binding protein YehZ	TC	1468615	1469532	+	3.A.1.12.15
MGYG000002535_01403	Glycine betaine uptake system permease protein YehY	TC	1469548	1470714	+	3.A.1.12.15
MGYG000002535_01404	Glycine betaine uptake system ATP-binding protein YehX	TC	1470707	1471654	+	3.A.1.12.15
MGYG000002535_01405	Glycine betaine uptake system permease protein YehW	TC	1471638	1472369	+	3.A.1.12.15
MGYG000002535_01406	hypothetical protein	null	1472350	1472457	-	No domain
MGYG000002535_01407	HTH-type transcriptional regulator MlrA	TF	1472510	1473241	-	MerR
MGYG000002535_01408	Sensor histidine kinase BtsS	TC	1473468	1475153	+	9.B.33.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature